Microbial carbon use efficiency promotes global soil carbon storage - Nature

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Microbial carbon use efficiency promotes global soil carbon storage - Nature
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Microorganisms are key to storing carbon in soils, shows new study nature

). We used the PRODA approach to optimize the microbial model at the global scale. Data assimilation was first applied at each SOC profile to estimate parameter values that best fit the observations. The estimated parameter values after the site-level data assimilation were further generalized to the global scale by a neural network model.

We conducted Bayesian data assimilation for each of the 57,267 SOC profiles with the MCMC method to estimate the parameter values of the microbial model that best fit the model simulations with SOC observations. One empirical constraint applied to data assimilation is that simulated MIC at steady state should be no more than 10% of the SOC storage over the entire soil profile.

We set 20,000 iterations for the test run and 50,000 iterations for the formal run. Eventually, we controlled the acceptance ratio of the formal run between 10% and 50%. We set the burn-in coefficient as 50%, where the first half of the accepted parameter values in the formal run was discarded, and the second half was used to generate the posterior distributions of the parameters. We calculated the mean values of the posterior distributions of the parameters as the final point estimates.

). This assumption makes data assimilation computationally more feasible than that under non-steady states (see the non-steady-state data assimilation

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